μABC: A systematic microsecond molecular dynamics study of tetranucleotide sequence effects in B-DNA

Marco Pasi; John H. Maddocks; David Beveridge; Thomas C. Bishop; David A. Case; Thomas Cheatham; Pablo D. Dans; B. Jayaram; Filip Lankas; Charles Laughton; Jonathan Mitchell; Roman Osman; Modesto Orozco; Alberto Pérez; Daiva Petkevičiūtė; Nada Spackova; Jiri Sponer; Jiri Sponer; Krystyna Zakrzewska; Richard Lavery

doi:10.1093/nar/gku855

μABC: A systematic microsecond molecular dynamics study of tetranucleotide sequence effects in B-DNA

Marco Pasi
, John H. Maddocks
, David Beveridge
, Thomas C. Bishop
, David A. Case
, Thomas Cheatham
, Pablo D. Dans
, B. Jayaram
, Filip Lankas
, Charles Laughton
, Jonathan Mitchell
, Roman Osman
, Modesto Orozco
, Alberto Pérez
, Daiva Petkevičiūtė
, Nada Spackova
, Jiri Sponer
, Jiri Sponer
, Krystyna Zakrzewska
, Richard Lavery

Chemistry

École Polytechnique Fédérale de Lausanne
Wesleyan University
Rutgers University
University of Utah
6Joint BSC-CRG-IRB Program on Computational Biology, Institute of Research in Biomedicine, Parc Científic de Barcelona, Josep Samitier 1-5, Barcelona 08028, Spain
Indian Institutes of Technology
Academy of Sciences of the Czech Republic
University of Nottingham
Icahn School of Medicine at Mount Sinai
Central European Institute of Technology
University of Lyon

Research output: Contribution to journal › Article › peer-review

Original language	English
Pages (from-to)	12272-12283
Number of pages	12
Journal	Nucleic Acids Research
Volume	42
Issue number	19
DOIs	https://doi.org/10.1093/nar/gku855
State	Published - Oct 29 2014

ASJC Scopus Subject Areas

Genetics

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10.1093/nar/gku855

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Pasi, M., Maddocks, J. H., Beveridge, D., Bishop, T. C., Case, D. A., Cheatham, T., Dans, P. D., Jayaram, B., Lankas, F., Laughton, C., Mitchell, J., Osman, R., Orozco, M., Pérez, A., Petkevičiūtė, D., Spackova, N., Sponer, J., Sponer, J., Zakrzewska, K., & Lavery, R. (2014). μABC: A systematic microsecond molecular dynamics study of tetranucleotide sequence effects in B-DNA. Nucleic Acids Research, 42(19), 12272-12283. https://doi.org/10.1093/nar/gku855

Pasi, M, Maddocks, JH, Beveridge, D, Bishop, TC, Case, DA, Cheatham, T, Dans, PD, Jayaram, B, Lankas, F, Laughton, C, Mitchell, J, Osman, R, Orozco, M, Pérez, A, Petkevičiūtė, D, Spackova, N, Sponer, J, Sponer, J, Zakrzewska, K & Lavery, R 2014, 'μABC: A systematic microsecond molecular dynamics study of tetranucleotide sequence effects in B-DNA', Nucleic Acids Research, vol. 42, no. 19, pp. 12272-12283. https://doi.org/10.1093/nar/gku855

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author = "Marco Pasi and Maddocks, \{John H.\} and David Beveridge and Bishop, \{Thomas C.\} and Case, \{David A.\} and Thomas Cheatham and Dans, \{Pablo D.\} and B. Jayaram and Filip Lankas and Charles Laughton and Jonathan Mitchell and Roman Osman and Modesto Orozco and Alberto P{\'e}rez and Daiva Petkevi{\v c}iūtė and Nada Spackova and Jiri Sponer and Jiri Sponer and Krystyna Zakrzewska and Richard Lavery",

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AU - Pasi, Marco

AU - Maddocks, John H.

AU - Beveridge, David

AU - Bishop, Thomas C.

AU - Case, David A.

AU - Cheatham, Thomas

AU - Dans, Pablo D.

AU - Jayaram, B.

AU - Lankas, Filip

AU - Laughton, Charles

AU - Mitchell, Jonathan

AU - Osman, Roman

AU - Orozco, Modesto

AU - Pérez, Alberto

AU - Petkevičiūtė, Daiva

AU - Spackova, Nada

AU - Sponer, Jiri

AU - Zakrzewska, Krystyna

AU - Lavery, Richard

PY - 2014/10/29

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JO - Nucleic Acids Research

JF - Nucleic Acids Research

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ER -

μABC: A systematic microsecond molecular dynamics study of tetranucleotide sequence effects in B-DNA

ASJC Scopus Subject Areas

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